Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943827.1_cds_XP_016486807.1_77610
CDS Infomation

[gene=LOC107807042] [db_xref=GeneID:107807042] [protein=pre-mRNA-splicing factor 38B-like] [protein_id=XP_016486807.1] [location=join(80247..80537,81584..81664,82552..82623,83367..84230)] [gbkey=CDS]
Sequence

ATGGCTGAGATTAAGACTTCTGGGAGACCGATCGACCAATTGCTGGAGAAGGTTCTGTGC
ATGAACATTCTCTCTTCTGATTATTTCAGAGACCTATTGCGCCTGAAAACTTATCACGAA
GTGATTGATGAAATTTATAATCAAGTTGACCATGTGGAACCATGGATGACTGGCAACTGT
CGTGGTCCTTCAACAGCCTTCTGCCTTCTCTACAAGTTCTTTACGATGAAACTTACTGTC
AAGCAAATGCATGGCCTGTTAAAGCATCCAGATTCTCCTTACATTAGAGCTGTTGGGTTC
CTTTATCTGAGATATCTTGCTGATTTTAAGACATTATGGGCTTGGTATGAGCCTTATCTC
AAAGATGATGAGGAATTCTCTCCTGGATCCAGTGGCCGAATGACCACAATGGGCGTATAT
GTGCGTGACTTATTTCTCGGACAGTATTATTTTGACACACTATTACCCCGGATTCCTGTT
CCTGTTATGCGGACAGCAGTTGCCAATCTCGAAAAAATGAATCTGCCGACCAAACTCTCT
GGTTCGATCGGGGACTCTAGTCGTGGATCTGAGGAAACCTCCCGTCGGCCACCTTCTGTC
AAAGCTTCCCTCTCAGTGTCTTTTGGTCAGCGTGCACCTCATCGTGCATCAACTAGAGAT
TCATCTCCCATCCGACGTACAATCGCACCACCACCCTATGATAAGGATGGTGCAGATGAT
TCAAGACGGTCCCCCAGCATCCGCCGGAGTCAAAGTCGTGATATATCTGACCGAGAGAAT
TCCGAAAGGGACAGGGGCCGAGACAGAGAGAGGGAGAAGGAAAAGCCTTGGGACAGAGAC
CGTGATAGGGATAGGGATCGATATAGGGACCGGGACCAGGAAAGAGAAAGGGAGAGGGGC
AGGGATCGGGATAGAGATAAGAGGTATGATTATGAGAGAGATCGTGAAAGGGATAGAGAC
AGGAGGTATGATTATGACAGAGATCGGGGAAGGGATAGAGACAGGAGGTATGATTATGAT
CGAAGTTCAAGAGAGAGAAGCAGAAGAGACTATGAGAGGAGCAGGAGCCGGAGTAGGAGT
CGAAGCCACAGCCGAAGTTTGCATGATCAAGGGACCAGTCTTGATCAACAGCGAACTCCA
CCTAGAGATGAAAGCAAGGAGAAGAAGGCTGCATCTAGCAATCTTGCCAAGCTTAAAGAT
CTATATGGTGACTTAGGCAATCAAAAGGAGAACGTAGGCGGCGAGAGAGCTCCAAATAGG
GATACAAGTACGGAGGAGGTTATCAGACTTGGTGGTTCATGGAGGTAG

Peptide Sequence

PEP ID

XP_016486807.1
PEP Infomation

PREDICTED: pre-mRNA-splicing factor 38B-like [Nicotiana tabacum]
Sequence

MAEIKTSGRPIDQLLEKVLCMNILSSDYFRDLLRLKTYHEVIDEIYNQVDHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAVGFLYLRYLADFKTLWAWYEPYL
KDDEEFSPGSSGRMTTMGVYVRDLFLGQYYFDTLLPRIPVPVMRTAVANLEKMNLPTKLS
GSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPIRRTIAPPPYDKDGADD
SRRSPSIRRSQSRDISDRENSERDRGRDREREKEKPWDRDRDRDRDRYRDRDQERERERG
RDRDRDKRYDYERDRERDRDRRYDYDRDRGRDRDRRYDYDRSSRERSRRDYERSRSRSRS
RSHSRSLHDQGTSLDQQRTPPRDESKEKKAASSNLAKLKDLYGDLGNQKENVGGERAPNR
DTSTEEVIRLGGSWR

Transcript Sequence

Gene sequence data has not been registered.